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Table 1 Most highly differentially expressed transcripts (top 50) comparing zero and eight hours post Salmonella infection in primary porcine neutrophils

From: Salmonella enterica serovar Typhimurium inhibits the innate immune response and promotes apoptosis in a ribosomal/TRP53-dependent manner in swine neutrophils

Gene symbol Refseq ID Source Average expression level (log2) Fold change q-value
SLC10A1 XM_001927695 Pig 10.8304 − 83.4142 2.69E−05
MME XM_003132501 Pig 12.6772 − 56.4129 2.69E−05
DOCK4 XM_021079281 Pig 11.1479 − 38.564 2.69E−05
NDUFB2 NM_001244885 Pig 13.3140 30.25678 2.69E−05
ABI3 XM_003358086 Pig 10.6394 − 22.1323 2.69E−05
CHI3L1 NM_001001540 Pig 12.4107 − 20.9822 2.69E−05
avrA – Salmonella 12.7307 16.48907 4.81E−05
R3HCC1 XM_021073022 Pig 10.9036 − 11.121 4.81E−05
H2AFY2 XM_021073865 Pig 12.9446 10.55971 4.81E−05
SIPA1L1 XM_005656372 Pig 11.3501 − 7.87188 4.81E−05
sseF – Salmonella 14.2728 14.12313 4.82E−05
flgM – Salmonella 6.4344 − 7.50741 4.82E−05
CRYBB3 XM_001929473 Pig 10.4932 − 23.3897 5.71E−05
PLOD2 XM_021069587 Pig 13.0709 128.5496 6.07E−05
DOCK10 XM_003133687 Pig 10.1372 − 23.3319 6.07E−05
CCDC146 XM_021102558 Pig 11.1119 − 10.1757 6.07E−05
SCAPER XM_021099012 Pig 13.1531 9.680022 6.07E−05
AGO3 NM_001194974 Pig 12.5285 7.508506 6.07E−05
HCAR3 XM_021072989 Pig 13.6520 − 19.7964 6.27E−05
DAB2 XM_021076649 Pig 14.9437 55.62877 6.35E−05
RPS11 NM_001244070 Pig 8.0332 − 8.02668 6.35E−05
rplE – Salmonella 9.0468 16.20982 6.46E−05
FAAH NM_213914 Pig 10.5260 − 14.8085 8.45E−05
TP53 NM_213824 Pig 13.3047 8.240427 8.59E−05
TMEM62 XM_021097051 Pig 10.7321 − 12.6827 8.86E−05
HIF1AN XM_003125588 Pig 10.9592 − 12.4298 9.13E−05
QPCT XM_003481245 Pig 12.9645 − 12.6145 9.82E−05
MIIP NM_001244704 Pig 12.8614 9.137871 0.000101
sseD – Salmonella 13.2127 22.39497 0.000112
PRIM1 NM_001243669 Pig 12.3116 14.28129 0.000112
ERLEC1 XM_003125147 Pig 12.7536 11.4634 0.000112
CCDC40 XM_021066501 Pig 10.7968 − 11.3155 0.000112
SLC39A8 XM_013979001 Pig 11.7795 8.270433 0.000112
pyrH – Salmonella 8.7281 21.67902 0.000116
RPL9 NM_001243481 Pig 6.2471 − 10.9441 0.000116
ACADM NM_214039 Pig 11.2439 6.03635 0.000116
FBXL5 XM_013978532 Pig 13.1740 − 35.0706 0.000127
OSGIN2 XM_001925927 Pig 12.3345 − 7.16605 0.000127
KIAA1551 NM_001243821 Pig 12.9331 − 20.2392 0.000132
PLEKHO1 XM_005655399 Pig 11.8700 − 8.81157 0.000143
RPL39 XM_005673863 Pig 6.6511 − 8.66867 0.000143
sopB – Salmonella 15.0980 18.36901 0.000143
CD69 NM_214091 Pig 10.0376 − 9.70064 0.000143
SERBP1 XM_003127934 Pig 11.5299 8.12229 0.000143
TMEM164 XM_021080001 Pig 11.4298 − 7.43192 0.000143
TMEM123 XM_005667282 Pig 10.0643 − 77.2179 0.000146
MACF1 XM_021095983 Pig 13.7886 12.70162 0.00015
RPL6 NM_001044542 Pig 6.3390 − 7.44624 0.00015
MED7 NM_001044615 Pig 13.3926 11.76379 0.000157
LSM8 XM_003134753 Pig 11.1819 5.565953 0.000159
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Veterinary Research

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